Sepsid even-skipped Enhancers Are Functionally Conserved in Drosophila Despite Lack of Sequence Conservation
Figure 3
Coding and non-coding trees of sepsids and Drosophila.
(A) Maximum likelihood tree of protein-coding genes inferred from seven genes using CODEML module of PAML [59]. Branch lengths are in substitutions per codon using the [F3×4] model. (B) Maximum likelihood non-coding trees of six Drosophila and six sepsids computed using the BASEML module of PAML [59]. Branch lengths are in substitutions per site using the HKY model.