Figures
Abstract
SGEF and Ephexin4 are members of the Ephexin subfamily of RhoGEFs that specifically activate the small GTPase RhoG. It is reported that Ephexin1 and Ephexin5, two well-characterized Ephexin subfamily RhoGEFs, are tyrosine-phosphorylated by Src, and that their phosphorylation affect their activities and functions. In this study, we show that SGEF, but not Ephexin4, is tyrosine-phosphorylated by Src. Tyrosine phosphorylation of SGEF suppresses its interaction with RhoG, the elevation of RhoG activity, and SGEF-mediated promotion of cell migration. We identified tyrosine 530 (Y530), which is located within the Dbl homology domain, as a major phosphorylation site of SGEF by Src, and Y530F mutation blocked the inhibitory effect of Src on SGEF. Taken together, these results suggest that the activity of SGEF is negatively regulated by tyrosine phosphorylation of the DH domain.
Citation: Okuyama Y, Umeda K, Negishi M, Katoh H (2016) Tyrosine Phosphorylation of SGEF Regulates RhoG Activity and Cell Migration. PLoS ONE 11(7): e0159617. https://doi.org/10.1371/journal.pone.0159617
Editor: Laszlo Buday, Hungarian Academy of Sciences, HUNGARY
Received: April 25, 2016; Accepted: July 6, 2016; Published: July 20, 2016
Copyright: © 2016 Okuyama et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Data Availability: All relevant data are within the paper.
Funding: This work was supported in part by Grants-in-aid for Scientific Research from the Ministry of Education, Science, Sports, and Culture of Japan (15K07928 and 15K07043) and by a grant from Takeda Science Foundation.
Competing interests: The authors have declared that no competing interests exist.
Introduction
It is already well known that members of the Rho family of small GTPases play pivotal roles in the regulation of cell morphology and migration. These cellular functions contribute to many steps in cancer initiation and progression [1–3]. Like other small GTPases, Rho family GTPases serve as molecular switches by cycling between an inactive GDP-bound state and an active GTP-bound state, and activated GTPases can bind to their specific effectors that lead to a variety of biological functions. Activation of the Rho family proteins requires GDP-GTP exchange catalyzed by various guanine nucleotide exchange factors (GEFs), whereas the activation of the GTPases is down-regulated by GTPase-activating proteins, which stimulate the intrinsic GTPase activities.
RhoG is a member of Rho family small GTPases that is a key upstream regulator of another Rho family member Rac, and induces diverse cellular functions, including promotion of cell migration, neurite outgrowth in neuronal cells, and stimulation of phagocytosis [4–7]. ELMO, an effector for RhoG, forms a complex with Rac GEF Dock180 or Dock4, and when RhoG is activated, it binds to ELMO to induce translocation of the ELMO-Dock180 or ELMO-Dock4 complex from the cytoplasm to the plasma membrane, leading to activation of Rac [6,8,9]. On the other hand, RhoG binds to phosphatidylinositol 3-kinase (PI3K) p85α regulatory subunit and activates the PI3K/Akt signaling pathway to promote cell proliferation and survival independently of the activation of Rac [10–12].
SGEF and Ephexin4 (also known as ARHGEF16) are closely related Dbl type RhoGEFs that specifically activates RhoG [13, 14]. Ephexin4 interacts with a tyrosine kinase receptor EphA2 and mediates ligand ephrin-independent promotion of cell migration and suppression of anoikis through activation of RhoG [14–17]. Ephexin4-mediated RhoG activation is also involved in engulfment of apoptotic cells and epithelial morphogenesis [18,19]. SGEF contributes to the formation of actin rich protrusions on the dorsal surface of endothelial cells, and promotes leukocyte trans-endothelial migration and blood vessel lumen morphogenesis [20,21]. SGEF is also involved in EGF receptor stability and signaling [22,23], remodeling of actin cytoskeleton stimulated by Salmonella [24], and formation of atherosclerosis [25]. On the other hand, SGEF is overexpressed in several types of cancers and promotes cancer cell growth and migration [26,27]. However, it is not fully understood how the activities of SGEF and Ephexin4 are regulated. In this study, we show that SGEF, but not Ephexin4, is tyrosine-phosphorylated by Src on tyrosine 530 (Y530), which is located within the Dbl homology (DH) domain, leading to suppression of SGEF-RhoG interaction and SGEF-mediated cell migration.
Materials and Methods
Plasmids and antibodies
The expression plasmid pCAG encoding YFP and pCXN2 vector [28] were generous gifts from Dr J. Miyazaki (Osaka University, Osaka, Japan). Src-Y527F was from Drs. T. Akagi (KAN Research Institute, Kobe, Japan) and M. Matsuda (Kyoto University, Kyoto, Japan) and subcloned into pEF-BOS with a HA tag sequence at the N-terminus. Plasmids expressing Flag-tagged Ephexin4, Myc-tagged RhoG, and GST-fused ELMO-NT were obtained as described previously [4,8,14]. Mouse SGEF sequence was amplified by RT-PCR from mouse brain RNA and subcloned into pCXN2 with a Flag tag sequence at the N-terminus. SGEF-Y378F, -Y452F, -Y527F, and -Y530F, and RhoG-G15A were generated by PCR-mediated mutagenesis and subcloned into pCXN2 or pGEX4T-2.
The following antibodies were used in this study: a mouse monoclonal antibody (mAb) against Myc (9E10, Santa Cruz Biotechnology); a mouse mAb against Flag (M2, Sigma); a mouse mAb against HA (3F10, Roche); a mouse mAb against phosphotyrosine (4G10, Millipore); secondary antibodies conjugated to horseradish peroxidase (DAKO).
Cell culture and transfection
HEK293T cells were grown in Dulbecco’s modified Eagle’s medium (DMEM) containing 10% FBS, 4 mM glutamine, 100 units/ml of penicillin, and 0.1 mg/ml of streptomycin under humidified air containing 5% CO2 at 37°C. Cells were transfected with the indicated plasmids using LipofectAMINE Plus, LipofectAMINE 2000 (Invitrogen), or polyethyleneimine MAX, according to the manufacturer’s instructions.
Transwell cell migration assay
Transwell cell migration assay was performed as described previously [14, 16]. HEK293T cells were transfected with YFP alone, or together with the indicated plasmids and incubated for 24 h. The cells were detached and then resuspended in serum free DMEM. The cells were replated onto the upper chamber of a Transwell filter (Costar, 8 μm pore size). DMEM supplemented with 10% FBS was added to the lower chamber. At 6 h after plating, cells were fixed with 4% paraformaldehyde in phosphate buffered saline. Non-migrated cells on the upper side of the filter were removed with a cotton swab. In parallel, cells were separately plated to culture wells without the Transwell filters for estimating the total number of attached cells. Cell migration was calculated by the number of YFP-positive cells underside of the filter normalized to the total number of the YFP-positive attached cells. For each experiment, the number of cells in at least 8 random fields on the underside of the filter was counted, and four or five independent filters were analyzed.
Immunoprecipitation and immunoblotting
Immunoprecipitation and immunoblotting were performed as described in detail previously [15, 17, 29]. After transfection, HEK293T cells were lysed for 10 min with ice-cold cell lysis buffer (20 mM Tris-HCl, pH7.5, 150 mM NaCl, 2 mM MgCl2, 1% TritonX-100, 10 mM NaF, 1 mM Na3VO4, 1 mM PMSF, 10 μg/ml Aprotinin, 10 μg/ml Leupeptin). After centrifugation for 10 min at 16,000 x g, the supernatants were incubated with anti-Flag antibody for 1 h followed by incubation with protein G Sepharose (GE Healthcare) for 1 h. After the beads were washed with the cell lysis buffer, the bound proteins were eluted in Laemmli sample buffer. The eluted proteins were separated by SDS-PAGE, and were electrophoretically transferred onto a polyvinylidene difluoride membrane (Millipore Corporation). The membrane was blocked with 3% low fat milk in Tris-buffered saline, and then incubated with primary antibodies. The primary antibodies were detected with horseradish peroxidase-conjugated secondary antibodies and chemiluminescence detection kit (ECL Prime, GE Healthcare; Chemi-Lumi One, Nacalai Tesque).
Measurement of RhoG activity
Measurement of RhoG activity in cells was performed as described previously [8, 15, 17]. The N-terminal RhoG-binding domain of ELMO2 (ELMO-NT, amino acids 1–362) was expressed in Escherichia coli as a fusion protein with GST and purified on glutathione-Sepharose beads (GE Healthcare). Protein concentration was determined by comparing with bovine serum albumin standards after SDS-PAGE and by staining with Coomassie Brilliant Blue. To determine RhoG activity in HEK293T cells, transfected cells were lysed with the ice-cold cell lysis buffer (10 mM Tris-HCl, pH 7.5, 100 mM NaCl, 2 mM MgCl2, 1% Nonidet P-40, 10% glycerol, 1 mM DTT, 1 mM PMSF, 10 μg/ml aprotinin, and 10 μg/ml leupeptin). Cell lysates were then centrifuged for 5 min at 10,000 x g at 4°C, and the supernatant was incubated with 20 μg of GST-ELMO-NT bound to glutathione-Sepharose beads for 30 min at 4°C. The beads were washed with lysis buffer, and bound proteins were analyzed by SDS-PAGE and immunoblotting.
Pull-down assay
GST-RhoG-G15A was expressed in Escherichia coli and purified on glutathione-Sepharose beads. HEK293T cells transfected with Flag-SGEF were lysed for 10 min with ice-cold cell lysis buffer (20 mM Tris-HCl, pH7.5, 150 mM NaCl, 2 mM MgCl2, 10 mM NaF, 1 mM Na3VO4, 1% Triton X-100, 1 mM PMSF, 10 μg/ml aprotinin, 10 μg/ml leupeptin). After centrifugation for 10 min at 16,000 x g, the supernatants were incubated with GST-fused RhoG-G15A bound to glutathione-Sepharose beads for 1 h. The beads were washed with the ice-cold cell lysis buffer, and bound proteins were analyzed by SDS-PAGE and immunoblotting.
Results
SGEF, but not Ephexin4, is-tyrosine phosphorylated by Src
SGEF and Ephexin4 are closely related Dbl type RhoGEFs, both of which specifically activate RhoG (Fig 1A) [13,14]. They are also considered as the members of a subfamily of Ephexin [30,31]. Among the Ephexin subfamily members, Ephexin1, Ephexin5, and ARHGEF5/Tim, which are GEFs for RhoA, are tyrosine-phosphorylated by Src or Eph receptors, and their phosphorylation is important for the GEF activity or protein stability [30,32–34]. To examine whether tyrosine phosphorylation also regulates the activities of RhoG-specific GEFs SGEF and Ephexin4, HEK293T cells were co-transfected with HA-tagged constitutively active Src, Src-Y527F (Src-YF) and Flag-tagged SGEF or Ephexin4. Then they were immunoprecipitated from the cell lysates with anti-Flag antibody and immunoblotted with anti-phosphotyrosine antibody 4G10. We found that SGEF was tyrosine phosphorylated in the presence of Src-YF, whereas we can not detect a clear band of phosphorylated Ephexin4 (Fig 1B). Previous studies have shown that Ephexin1 and Ephexin5 are tyrosine phosphorylated in a conserved N-terminal motif (LYQ) among Ephexin subfamily members [30,32]. SGEF also contains an analogous tyrosine residue in the N-terminus (Y378, Fig 1A), raising the possibility that Y378 might be a phosphorylation site of SGEF by Src. However, a mutant of SGEF in which Y378 is substituted with a phenylalanine (SGEF-Y378F) was tyrosine-phosphorylated when it was co-transfected with Src-YF to a level comparable with that of wild-type SGEF (Fig 1C). These results suggest that SGEF, but not Ephexin4, is tyrosine-phosphorylated by Src in a region other than the conserved N-terminal LYQ motif.
(A) The domain structure of SGEF and Ephexin4. Tyrosine residues in the LYQ motif correspond to the phosphorylation sites of Ephexin1 and Eohexin5 by Src. (B, C) Cell lysates from HEK293T cells transfected with the indicated plasmids were immunoprecipitated with anti-Flag antibody, and tyrosine phosphorylation (p-Tyr) and total cell lysates were analyzed by immunoblotting with antibodies against phospho-tyrosine, Flag, and HA.
Src suppresses SGEF-mediated RhoG activation and promotion of cell migration
Previous studies reported that SGEF and Ephexin4 mediate promotion of cell migration [14,16,27]. Therefore, we next investigated the effect of Src-YF expression on the SGEF- and Ephexin4-mediated promotion of cell migration. Using an in vitro transwell migration assay, overxpression of wild-type SGEF (SGEF-WT) or Ephexin4 in HEK293T cells promoted cell migration. Co-expression of Src-YF with SGEF-WT significantly suppressed the SGEF-mediated promotion of cell migration (Fig 2A). In contrast, expression of Src-YF did not suppress the Ephexin4-mediated promotion of cell migration (Fig 2B). These results raised the possibility that phosphorylation of SGEF by Src affects SGEF activity. To explore this possibility, we measured RhoG activity in cells expressing SGEF-WT alone or together with Src-YF by a pull-down assay with GST-fused N-terminal RhoG-binding region of ELMO (GST-ELMO-NT), which could specifically interact with GTP-bound active RhoG [8,14]. Expression of SGEF-WT in HEK293T cells increased the amount of active RhoG, while co-expression of Src-YF significantly suppressed the SGEF-induced RhoG activation (Fig 2C). These results suggest that Src acts as a negative regulator of SGEF.
(A) Motility of HEK293T cells was evaluated by Transwell cell migration assays. HEK293T cells transfected with YFP alone or together with the indicated plasmids were plated in the upper chamber of the filters, and cells that had migrated to the underside of the filters were analyzed at 6 h after plating. Results are expressed as means ± SEM (n = 5) of relative cell migration, with SGEF-WT-transfected cell migration set at 1 (*P < 0.05, ***P < 0.001, t-test). (B) HEK293T cells transfected with YFP alone or together with the indicated plasmids were plated in the upper chamber of the filters, and cells that had migrated to the underside of the filters were analyzed at 6 h after plating. Results are expressed as means ± SEM (n = 4) of relative cell migration, with Ephexin4-WT-transfected cell migration set at 1 (ns, not significant, ***P < 0.001, t-test). (C) Cell lysates from HEK293T cells transfected with indicated plasmids were incubated with GST-ELMO-NT, and bound Myc-RhoG (GST-ELMO-NT pull-down) and total cell lysates were analyzed with antibodies against Myc, Flag, and HA. The amount of bound Myc-RhoG was normalized to the total amount of Myc RhoG in cell lysates, and relative RhoG activity was expressed as fold change relative to the basal activity (None). Data are presented as means ± SEM from four independent experiments (*P < 0.05, ***P < 0.001, t-test).
Phosphorylation of SGEF by Src suppresses the interaction between SGEF and RhoG
To elucidate the mechanism of regulation of SGEF activity by Src, we examined the interaction between SGEF and RhoG. HEK293T cells were transfected with Flag-tagged SGEF-WT alone or together with HA-tagged Src-YF, and the cell lysates were used in a pull-down assay with purified GST-fused RhoG containing the G15A mutation (RhoG-G15A), which binds with high affinity to SGEF [27]. SGEF bound to GST-fused RhoG-G15A, but co-expression of Src-YF inhibited the SGEF-RhoG interaction (Fig 3A). To confirm that the kinase activity of Src is required for its inhibitory effect on the SGEF-RhoG interaction, HEK293T cells transfected with Flag-SGEF-WT and HA-Src-YF were treated with the Src family kinase inhibitor PP2 or its inactive analogue PP3, and the cell lysates were used in GST pull-down assay. PP2 treatment abolished Src-YF-mediated inhibition of the SGEF-RhoG interaction, whereas PP3 treatment had no effect (Fig 3B). These results suggest that phosphorylation of SGEF by Src inhibits SGEF-RhoG interaction.
(A) Cell lysates from HEK293T cells transfected with the indicated plasmids were incubated with GST-RhoG-G15A, and bound Flag-SGEF (GST-RhoG-G15A pull-down) and total cell lysates were analyzed by immunoblotting with anti-Flag and anti-HA antibodies. (B) HEK293T cells were transfected with the indicated plasmids and treated for 30 min with 20 μM PP2 or PP3. Then cell lysates were incubated with GST-RhoG-G15A, and bound Flag-SGEF and total cell lysates were analyzed by immunoblotting with anti-Flag and anti-HA antibodies.
Y530 is identified as an important phosphorylation site in SGEF
Because tyrosine phosphorylation of SGEF inhibited its interaction with RhoG, we speculated that a tyrosine residue(s) within the DH domain are an important phosphorylation site(s) by Src. There are five tyrosine residues in the DH domain of SGEF. Among them, Y452, Y527, and Y530 of SGEF are candidate tyrosine residues, because their corresponding amino acids in RacGEF Tiam1 are located near the Tiam1/Rac1 interface in the crystal structure of the DH domain of Tiam1 in complex with Rac1 [35]. In addition, these tyrosine residues are conserved in five mammalian SGEFs and the chicken and Xenopus SGEF orthologs. We therefore generated three SGEF mutants (SGEF-Y452F, -Y527F, -Y530F) to examine whether Src-YF can phosphorylate these SGEF mutants. HEK293T cells were co-transfected with HA-tagged Src-YF and Flag-tagged SGEF-WT or SGEF mutants. Then they were immunoprecipitated from the cell lysates with anti-Flag antibody and immunoblotted with anti-phosphotyrosine antibody. SGEF-Y452F and -Y527F were tyrosine-phosphorylated by Src-YF to a level similar to SGEF-WT. However, Y530F mutation greatly reduced Src-YF-induced SGEF tyrosine phosphorylation (Fig 4A), indicating that Y530 is one of major phosphorylation site of SGEF by Src. To test whether phosphorylation of Y530 regulates the interaction between SGEF and RhoG, HEK293T cells were transfected with Flag-tagged SGEF alone or together with HA-tagged Src-YF, and the cell lysates were used in a pull-down assay with GST-RhoG-G15A. Co-exoression of Src-YF with SGEF-WT or -Y527F mutant inhibited their interaction with RhoG-G15A. However, co-expression of Src-YF had little effect on the interaction between SGEF-Y530F and RhoG-G15A (Fig 4B). Co-expression of Src-YF also had little effect on the SGEF-Y530F-induced RhoG activation (Fig 4C). These results suggest that Y530 phosphorylation of SGEF negatively regulates SGEF-RhoG interaction and the RhoG activation.
(A) Cell lysates from HEK293T cells transfected with the indicated plasmids were immunoprecipitated with anti-Flag antibody, and tyrosine phosphorylation (p-Tyr) and total cell lysates were analyzed by immunoblotting with antibodies against phospho-tyrosine, Flag, and HA. (B) Cell lysates from HEK293T cells transfected with the indicated plasmids were incubated with GST-RhoG-G15A, and bound Flag-SGEF and total cell lysates were analyzed by immunoblotting with anti-Flag and anti-HA antibodies. (C) Cell lysates from HEK293T cells transfected with indicated plasmids were incubated with GST-ELMO-NT, and bound Myc-RhoG and total cell lysates were analyzed with antibodies against Myc, Flag, and HA.
We next tested whether Y530 phosphorylation of SGEF regulates SGEF-mediated promotion of cell migration. Although co-expression of Src-YF with SGEF-WT significantly suppressed the SGEF-mediated promotion of cell migration (Fig 2A), expression of Src-YF had little effect on the SGEF-Y530F-mediated promotion of cell migration (Fig 5A). These results suggest that Y530F phosphorylation of SGEF plays an important role in the regulation of SGEF activity and function. To examine whether the regulation of SGEF by tyrosine phosphorylation is cell type dependent, we used another cell line HeLa. Consistent with the results obtained from HEK293T cells, expression of Src-YF induced tyrosine phosphorylation of SGEF-WT, but not SGEF-Y530F, in HeLa cells (Fig 5B). In addition, Src-YF significantly suppressed the SGEF-WT-induced promotion of cell migration, whereas it had little effect on the SGEF-Y530F-mediated promotion of cell migration (Fig 5C). Thus, the regulation of SGEF by tyrosine phosphorylation is not specific to HEK293T cells.
(A) HEK293T cells transfected with YFP alone or together with the indicated plasmids were plated in the upper chamber of the filters, and cells that had migrated to the underside of the filters were analyzed at 6 h after plating. Results are expressed as means ± SEM (n = 3) of relative cell migration, with SGEF-Y530F-transfected cell migration set at 1 (*P < 0.05, **P < 0.01, t-test). (B) Cell lysates from HeLa cells transfected with the indicated plasmids were immunoprecipitated with anti-Flag antibody, and tyrosine phosphorylation (p-Tyr) and total cell lysates were analyzed by immunoblotting with antibodies against phospho-tyrosine, Flag, and HA. (C) HeLa cells transfected with YFP alone or together with the indicated plasmids were plated in the upper chamber of the filters, and cells that had migrated to the underside of the filters were analyzed at 6 h after plating. Results are expressed as means ± SEM (n = 3) of relative cell migration, with SGEF-WT or Y530F-transfected cell migration set at 1 (ns, not significant, *P < 0.05, **P < 0.01, t-test).
Discussion
Small GTPase RhoG is a key upstream regulator of small GTPase Rac through its effector ELMO/Dock180 or ELMO/Dock4 complex [8,9]. Activation of Rac induces the formation of actin-rich lamellipodia protrusions, which serves as a major driving force of cell movement, and Rac activation is essential for cell migration in various cell types [36, 37]. Therefore, the regulation of RhoG activity is important for the control of Rac activity and cell motility. In fact, abnormal RhoG activation leads to promotion of cancer cell migration and invasion [14,27,38]. SGEF is a RhoG-specific GEF, and also promotes cell migration and invasion in glioblastoma [27]. SGEF-mediated RhoG activation occurs in response to some stimuli [20,27], but its regulatory mechanism is not well understood. In this study, we provide evidence that the GEF activity of SGEF is regulated by its tyrosine phosphorylation. Tyrosine kinase Src phosphorylates SGEF on Y530, which is located within the DH domain. SGEF Y530 phosphorylation blocks its interaction with RhoG and suppresses RhoG activation, leading to reduced cell migration. Thus, this is a novel mechanism regulating RhoG activity and cell motility, and may contribute to preventing over-activation of RhoG and aberrant cell migration.
The domain structure of SGEF is similar to Ephexin subfamily RhoGEFs: they contain the DH-PH domain followed by the SH3 domain at the C-terminus. SGEF also has a conserved motif among Ephexin subfamily members at the N-terminus, LYQ, and the tyrosine residues in this motif of Ephexin1 and Ephexin5 are phosphorylated by Src or Eph receptors [30,32]. Tyrosine phosphorylation of Ephexin1 in the LYQ motif promotes its GEF activity against RhoA, whereas tyrosine phosphorylation of Ephexin5 triggers its ubiquitination and degradation. SGEF and Ephexin4 are RhoG-specific GEFs among the Ephexin subfamily members, and also have the LYQ motif at the N-terminus. However, our results reveal that SGEF is not phosphorylated on the tyrosine residue in this motif but phosphorylated on Y530 within the DH domain. On the other hand, Src does not appear to induce tyrosine phosphorylation of Ephexin4. Src phosphorylates another Ephexin member Tim (ARHGEF5) on two tyrosine residues in the N-terminus, and phosphorylation of these tyrosine residues promotes its GEF activity by relieving the autoinhibitory intramolecular interaction [33]. Thus, the regulatory mechanisms of the GEF activity by tyrosine phosphorylation are different among Ephexin subfamily members.
Phosphorylation of RhoGEFs is one of major regulatory mechanisms for both stimulation and inhibition of their activities. It is well known that the activity of Vav is positively regulated by tyrosine phosphorylation, which releases the autoinhibitory intramolecular interaction between the N-terminal region and the DH domain [39]. Phosphorylation-dependent stimulation of the GEF activity is also observed in several RhoGEFs, including Tiam1 [40], GEF-H1 [41], Dbs [42], and FLJ00018/PLEKHG2 [43]. On the other hand, some RhoGEFs are inhibited by their phosphorylation. For example, Aurora A/B and Cdk1/Cyclin B phosphorylate GEF-H1 and inhibit the GEF activity [44]. Protein kinase A phosphorylates Lfc and β1Pix and promotes their interactions with 14-3-3, leading to inhibition of their GEF activities [45,46]. However, phosphorylation sites of these RhoGEFs are not located within the DH domain, and little is known about the regulation of RhoGEF activity by phosphorylation of the DH domain. Gupta et al. recently reported that Dbl, a GEF for RhoA and Cdc42, is phosphorylated on a tyrosine residue within the DH domain, leading to its interaction with Grb2 and promotion of the GEF activity [47]. Our results demonstrate that tyrosine phosphorylation within the DH domain of SGEF inhibits its interaction with RhoG and RhoG activation. However, there is still one major question whether phosphorylation of SGEF directly inhibits its ability to bind RhoG, because our data does not rule out the possibility that other proteins in the cell lysate may bind phosphorylated SGEF and prevent the interaction with, and subsequent activation of RhoG. We will address this issue in future work.
Acknowledgments
We thank Dr. Tetsuichiro Saito (Chiba University, Chiba, Japan) for providing an YFP expression vector, Dr. Junichi Miyazaki (Osaka University, Osaka, Japan) for a CAG promoter-containing vector, and Dr. Tsuyoshi Akagi (KAN Research Institute, Kobe, Japan) and Dr. Michiyuki Matsuda (Kyoto University, Kyoto, Japan) for providing an expression vector of Src-Y527F.
Author Contributions
Conceived and designed the experiments: YO KU MN HK. Performed the experiments: YO KU HK. Analyzed the data: YO KU MN HK. Contributed reagents/materials/analysis tools: YO HK. Wrote the paper: YO KU MN HK.
References
- 1. Etienne-Manneville S, Hall A. Rho GTPases in cell biology. Nature 2002;420: 629–635. pmid:12478284
- 2. Sahai E, Marshall CJ. Rho-GTPases and cancer. Nat Rev Cancer 2002;2: 133–142. pmid:12635176
- 3. Vega FM, Ridley AJ. (2008) Rho GTPases in cancer cell biology. FEBS Lett. 2008;582: 2093–2101. pmid:18460342
- 4. Katoh H, Yasui H, Yamaguchi Y, Aoki J, Fujita H, Mori K, Negishi M. Small GTPase RhoG is a key regulator for neurite outgrowth in PC12 cells. Mol Cell Biol. 2000;20: 7378–7387. pmid:10982854
- 5. deBakker CD, Haney LB, Kinchen JM, Grimsley C, Lu M, Klingele D, Hsu PK, Chou BK, Cheng LC, Blangy A, Sondek J, Hengartner MO, Wu YC, Ravichandran KS. Phagocytosis of apoptotic cells is regulated by a UNC-73/TRIO-MIG-2/RhoG signaling module and armadillo repeats of CED-12/ELMO. Curr Biol. 2004;14: 2208–2216. pmid:15620647
- 6. Katoh H, Hiramoto K, Negishi M. Activation of Rac1 by RhoG regulates cell migration. J Cell Sci. 2006;119: 56–65. pmid:16339170
- 7. Elfenbein A, Rhodes JM, Meller J, Schwartz MA, Matsuda M Simons M. Suppression of RhoG activity is mediated by a syndecan 4-synectin-RhoGDI1 complaex and is reversed by PKCa in a Rac1 activation pathway. J Cell Biol. 2009;186: 75–83. pmid:19581409
- 8. Katoh H, Negishi M. RhoG activates Rac1 by direct interaction with the Dock180-binding protein Elmo. Nature 2003;424: 461–464. pmid:12879077
- 9. Hiramoto K, Negishi M, Katoh H. Dock4 is regulated by RhoG and promotes Rac-dependent cell migration. Exp Cell Res. 2006;312: 4205–4216. pmid:17027967
- 10. Murga C, Zohar M, Teramoto H, Gutkind J.S. Rac1 and RhoG promote cell survival by the activation of PI3K and Akt, independently of their ability to stimulate JNK and NF-kB. Oncogene 2002;21: 207–216. pmid:11803464
- 11. Yamaki N, Negishi M, Katoh H. RhoG regulates anoikis through a phosphatidylinositol 3-kinase-dependent mechanism. Exp Cell Res. 2007;313: 2821–2832. pmid:17570359
- 12. Fujimoto S, Negishi M, Katoh H. RhoG promotes neural progenitor cell proliferation in mouse cerebral cortex. Mol Biol Cell 2009;20: 4941–4950. pmid:19812248
- 13. Ellerbroek SM, Wennerberg K, Arthur WT, Dunty JM, Bowman DR, DeMali KA, Der C, Burridge K. SGEF, a RhoG guanine nucleotide exchange factor that stimulates macropinocytosis. Mol Biol Cell 2004;15: 3309–3319. pmid:15133129
- 14. Hiramoto-Yamaki N, Takeuchi S, Ueda S, Harada K, Fujimoto S, Negishi M, Katoh H. Ephexin4 and EphA2 mediate cell migration through a RhoG-dependent mechanism. J Cell Biol. 2010;190: 461–477. pmid:20679435
- 15. Harada K, Hiramoto-Yamaki N, Negishi M, Katoh H. Ephexin4 and EphA2 mediate resistance to anoikis through RhoG and phosphatidylinositol 3-kinase. Exp Cell Res. 2011;317: 1701–1713. pmid:21621533
- 16. Kawai H, Kobayashi M, Hiramoto-Yamaki N, Harada K, Negishi M, Katoh H. Ephexin4-mediated promotion of cell migration and anoikis resistance is regulated by serine 897 phosphorylation of EphA2. FEBS Open Bio 2013;3: 78–82. pmid:23772378
- 17. Akada M, Harada K, Negishi M, Katoh H. EphB6 promotes anoikis by modulating EphA2 signaling. Cell Signal. 2014;26: 2879–2884. pmid:25239188
- 18. Lee J, Park B, Kim G, Kim K, Pak J, Kim K, Ye MB, Park S-G Park D. Arhgef16, a novel Elmo1 binding partner, promotes clearance of apoptotic cells via RhoG-dependent Rac1 activation. Biochim. Biophys. Acta 2014;1843: 2438–2447. pmid:25063526
- 19. Harada K, Negishi M, Katoh H. HGF-induced serine 897 phosphorylation of EphA2 regulates epithelial morphogenesis of MDCK cells in 3D cultute. J Cell Sci. 2015;128: 1912–1921. pmid:25908849
- 20. van Buul JD, Allingham MJ, Samson T, Meller J, Boulter E, Garcia-Mata R, Burridge K. RhoG regulates endothelial apical cup assembly downstream from ICAM1 engagement and is involved in leukocyte trans-endothelial migration. J Cell Biol. 2007;178: 1279–1293. pmid:17875742
- 21. Abraham S, Scarcia M, Bagshaw RD, McMahon K, Grant G, Harvey T, Yeo M, Esteves FOG, Thygesen HH, Jones PF, Speirs V, Hanby AM, Selby PJ, Lorger M, Dear N, Pawson T, Marshall CJ, Mavria G. A Rac/Cdc42 exchange factor complex promotes formation of lateral filopodia and blood vessel lumen morphogenesis. Nat Commun. 2015;6: 7286. pmid:26129894
- 22. Wang H, Li S, Li H, Li C, Guan K, Luo G, Yu L, Wu R, Zhang X, Wang J, Zhou J. SGEF enhances EGFR stability through delayed EGFR trafficking from early to late endosomes. Carcinogenesis 2013;34: 1976–1983. pmid:23661635
- 23. Wang H, Li S, Li H, Wang P, Huang F, Zhao Y, Yu L, Luo G, Zhang X, Wang J, Zhou J. Grb2 interacts with SGEF and antagonizes the ability of SGEF to enhance EGF-induced ERK1/2 activation. Mol Cell Biochem. 2013;389: 239–247.
- 24. Patel JC, Galan JE. Differential activation and function of Rho GTPases guring Salmonella-host cell interactions. J Cell Biol. 2006;175: 453–463. pmid:17074883
- 25. Samson T, van Buul JD, Kroon J, Welch C, Bakker EN, Matlung HL, van den Berg TK, Sharek L, Doerschuk C, Hahn K, Burridge K. The guanine-nucleotide exchange factor SGEF plays a crucial role in the formation of atherosclerosis. PLoS One 2013;8: e55202. pmid:23372835
- 26. Wang H, Wu R, Yu L, Wu F, Li S, Zhao Y, Li H, Luo G, Wang J, Zhou J. SGEF is overexpressed in prostate cancer and contributes to prostate cancer progression. Oncol Rep. 2012;28: 1468–1474. pmid:22824926
- 27. Fortin Ensign SP, Mathews IT, Eschbacher JM, Loftus JC, Symons MH, Tran NL. The Src homology 3 domain-containing guanine nucleotide exchange factor is overexpressed in high-grade gliomas and promotes tumor necrosis factor-like weak inducer of apoptosis-fibroblast growth factor-inducible 14-induced cell migration and invasion via tumor necrosis factor receptor-associated factor 2. J Biol Chem. 2013;288: 21887–21897. pmid:23775076
- 28. Niwa H, Yamamura K, Miyazaki J. Efficient selection for high-expression transfectants with a novel eukaryotic vector. Gene 1991;108: 193–200. pmid:1660837
- 29. Katoh H, Harada A, Mori K, Negishi M. Socius is a novel Rnd GTPase-interacting protein involved in disassembly of actin stress fibers. Mol Cell Biol. 2002;22: 2952–2964. pmid:11940653
- 30. Sahin M, Greer PL, Lin MZ, Poucher H, Eberhart J, Schmidt S, Wright TM, Shamah SM, O’Connell S, Cowan CW, Hu L, Goldberg JL, Debant A, Corfas G, Krull CE, Greenberg ME. Eph-dependent tyrosine phosphorylation of ephexin1 modulates growth cone collapse. Neuron 2005;46: 191–204. pmid:15848799
- 31. Wang Y, Suzuki H, Yokoo T, Tada-Iida K, Kihara R, Miura M, Watanabe K, Sone H, Shimano H, Toyoshima H, Yamada N. WGEF is a novel RhoGEF expressed in intestine, liver, heart, and kidney. Biochem Biophys Res Commun. 2004;324: 1053–1058. pmid:15485661
- 32. Margolis SS, Salogiannis J, Lipton DM, Mandel-Brehm C, Wills ZP, Mardinly AR, Hu L, Greer PL, Bikoff JB, Ho HYH, Soskis MJ, Sahin M, Greenberg ME. EphB-mediated degradation of the RhoA GEF Ephexin5 relieves a developmental brake on excitatory synapse formation. Cell 2010;143: 442–455. pmid:21029865
- 33. Yohe ME, Rossman KL, Gardner OS, Karnoub AE, Snyder JT, Gershburg S, Graves LM, Der CJ, Sondek J. Auto-inhibition of the Dbl family protein Tim by an N-terminal helical motif. J Biol Chem. 2007;282: 12813–13823.
- 34. Kuroiwa M, Oneyama C, Nada S, Okada M. The guanine nucleotide exchange factor Arhgef5 plays crucial roles in Src-induced podosome formation. J Cell Sci. 2011;124: 1726–1738. pmid:21525037
- 35. Worthylake DK, Rossman KL, Sondek J. Crystal structure of Rac1 in complex with the guanine nucleotide exchange region of Tiam1. Nature 2000;408: 682–688. pmid:11130063
- 36. Krause M, Gautreau A. Steering cell migration: lamellipodium dynamics and the regulation of directional persistence. Nat Rev Mol Cell Biol. 2014;15: 577–590. pmid:25145849
- 37. Ridley AJ. Rho GTPase signaling in cell migration. Curr Opin Cell Biol. 2015;36: 103–112. pmid:26363959
- 38. Kwiatkowska A, Didier S, Fortin S, Chuang Y, White T, Berens ME, Rushing E, Eschbacher J, Tran NL, Chan A, Symons M. The small GTPase RhoG mediates glioblastoma cell invasion. Mol Cancer 2012;11: 65. pmid:22966858
- 39. Aghazadeh B, Lowry WE, Huang XY, Rosen MK. Structural basis for relief of autoinhibition of the Dbl homology domain of proto-oncogene Vav by tyrosine phosphorylation. Cell 2000;102: 625–633. pmid:11007481
- 40. Fleming IN, Elliott CM, Buchanan FG, Downes CP, Exton JH. Ca2+/Calmodulin-dependent protein kinase II regulates Tiam1 by reversible protein phosphorylation. J Biol Chem. 1999;274: 12753–12758. pmid:10212259
- 41. Fujishiro S, Tanimura S, Mure S, Kashimoto S, Watanabe K, Kohno M. ERK1/2 phosphorylates GEF-H1 to enhance its guanine nucleotide exchange activity toward RhoA. Biochem Biophys Res Commun. 2008;368: 162–167. pmid:18211802
- 42. Yamauchi J, Chan JR, Miyamoto Y, Tsujimoto G, Shooter EM. The neurotrophin-3 receptor TrkC directly phosphorylates and activates the nucleotide exchange factor Dbs to enhance Schwann cell migration. Proc Natl Acad Sci USA 2005;102: 5198–5203. pmid:15758069
- 43. Sato K, Sugiyama T, Nagase T, Kitade Y, Ueda H. Threonine 680 phosphorylation of FLJ00018/PLEKHG2, a Rho family-specific guanine nucleotide exchange factor, by epidermal growth factor receptor signaling regulates cell morphology of Neuro-2a cells. J Biol Chem. 2014;289: 10045–10056. pmid:24554703
- 44. Birkenfeld J, Nalbant P, Bohl BP, Pertz O, Hahn KM, Bokoch GM. GEF-H1 modulates localized RhoA activation during cytokinesis under the control of mitotic kinases. Dev Cell 2007;12: 699–712. pmid:17488622
- 45. Chahdi A, Sorokin A. Protein kinase A-dependent phosphorylation modulates β1Pix guanine nucleotide exchange factor activity through 14-3-3β binding. Mol Cell Biol. 2008;28: 1679–1687. pmid:18160719
- 46. Meiri D, Greeve MA, Brunet A, Finan D, Wells CD, LaRose J, Rottapel R. Modulation of Rho guanine exchange factor Lfc activity by protein kinase A-mediated phosphorylation. Mol Cell Biol. 2009;29: 5963–5973. pmid:19667072
- 47. Gupta M, Qi X, Thakur V, Manor D. Tyrosine phosphorylation of Dbl regulates GTPase signaling. J Biol Chem. 2014;289: 17195–17202. pmid:24778185