Ultra High Content Image Analysis and Phenotype Profiling of 3D Cultured Micro-Tissues
Figure 3
2D PCA plot of phenotype profiles for various active compounds and their concentration dependent phenotypic trajectories.
(a) 2D PCA plot of phenotype profiles for negative control (DMSO) and 12 active compounds at different concentrations. Percentages of data variation preserved in each principle component are shown with each axis. Compounds with the same biological target are colored identically. Red: BCR-ABL target inhibitor; Yellow: VEFGR inhibitor; Green: EGFR inhibitor; Purple: HDAC inhibitor; Blue: c-MET inhibitor. Concentration is represented by the size of data points. The trend lines were added for each effective compound using 2nd polynomial regression models. (b) Comparison of microscope images of four example compounds with two DMSO control images. Each compound has a different biological target. 2D projected images from the Rhoadamine stained F-actin channel are shown here. Scale bar represents 500 micrometer
